Introduction to DataViewer

Introduction to DataViewer

DataViewer is an app dedicated to exploring mesoscale imaging data. The app allows one to perform basic data exploration by moving through frames and events. One can also inspect the temporal profile of individual pixels or regions of interest (ROIs).

Start MATLAB with umIT on the path. To open data immediately, have a supported .dat or image-kind .umt file available.

Open the app

  1. Run DataViewer; in MATLAB, or run DataViewer("path/to/file.dat"); to open a file immediately.
  2. If no file was supplied, choose File > Open.
  3. Check the status line and the recording context shown above the image.

Current DataViewer with a demonstration recording
Current DataViewer: application tabs, image, temporal profile, ROI table, and event controls.

What you are looking at

AreaPurpose
Utilities, Pipeline, ROIsOpen related tools, configure processing, and create or manage ROIs.
Image ViewShows the selected frame. Clicking a pixel moves the crosshair and updates the temporal profile.
Temporal ProfileShows the selected pixel or visible ROI signals over time.
ROI tableControls ROI selection, visibility, names, colors, and measurements.
EventsSwitches between continuous and event-aligned views when valid event metadata exists.

What is saved?
Opening and viewing data does not change the imaging file. Display choices stay in memory unless a specific save or export command says otherwise.


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