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UmIT
Home
About
System requirements
Getting started
DataViewer app
Data Import
Data processing
Basic data exploration
umIToolbox app
Start a project
Creating a new project file
Experiment data management
Data processing
Data exploration
Group data and visualize
Documentation
Apps
DataViewer
ROImanager
umIToolbox
Tools
Pipeline Configuration
Events manager
Multi-plot tool
Manual image registration
Line/Box plot
Correlation Matrix plot
Plot Average Maps
Merge recordings
Functions
Data import & export
run_ImagesClassification
importFromTif
getEvents
run_ConvertToTiff
Filters
GSR
apply_aggregate_function
spatialGaussFilt
normalizeBSLN
normalizeLPF
normalizeZScore
Imaging
SPCM
alignFrames
apply_detrend
calculate_response_amplitude
genRetinotopyMaps
genVSM
run_Ana_Speckle
run_HemoCompute
run_HemoCorrection
run_SpeckleMapping
split_data_by_event
trim_movie
Analysis functions
calculateResponseFeatures
genCorrelationMatrix
getDataFromROI
transformDat2Mat
Advanced User Resources
Batch processing
Creating custom functions (umIToolbox)
Organization of .mat files
Statistical analysis
umIT on GitHub
umIT on GitHub
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Documentation
Functions
Analysis functions
Analysis functions
Table of contents
Extract ROI data (getDataFromROI)
Export
.dat
data to
.mat
(transformDat2Mat)
ROI event-triggered data response features (calculateResponseFeatures)
Correlation matrix of ROI data (genCorrelationMatrix)